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Antibiotic susceptibility among non-clinical Escherichia coli as a marker of antibiotic pressure in Peru (2009–2019): one health approach

*Corresponding author for this work
Research Output:
Contribution to journal
Review article
Peer-review

Open access

Publication Information

Output type

Research Output:
Contribution to journal
Review article
Peer-review

Original language

English

Article number

e10573

Journal (Volume, Issue Number)

Heliyon (Volume 8, Issue 9)

Publication milestones

  • Published - 09/2022

Publication status

Published - 09/2022

ISSN

2405-8440

Publication IDs

  • Scopus: 85137783541

Abstract

Objective: Antimicrobial resistance is an increasing health problem worldwide with serious implications in global health. The overuse and misuse of antimicrobials has resulted in the spread of antimicrobial-resistant microorganisms in humans, animals and the environment. Surveillance of antimicrobial resistance provides important information contributing to understanding dissemination within these environments. These data are often unavailable in low- and middle-income countries, such as Peru. This review aimed to determine the levels of antimicrobial resistance in non-clinical Escherichia coli beyond the clinical setting in Peru. Methods: We searched 2009–2019 literature in PUBMED, Google Scholar and local repositories. Results: Thirty manuscripts including human, food, environmental, livestock, pets and/or wild animals’ samples were found. The analysis showed high resistance levels to a variety of antimicrobial agents, with >90% of resistance for streptomycin and non-extended-spectrum cephalosporin in livestock and food. High levels of rifamycin resistance were also found in non-clinical samples from humans. In pets, resistance levels of 70–>90% were detected for quinolones tetracycline and non-extended spectrum cephalosporins. The results suggest higher levels of antimicrobial resistance in captive than in free-ranging wild-animals. Finally, among environmental samples, 50–70% of resistance to non-extended-spectrum cephalosporin and streptomycin was found. Conclusions: High levels of resistance, especially related to old antibacterial agents, such as streptomycin, 1st and 2nd generation cephalosporins, tetracyclines or first-generation quinolones were detected. Antimicrobial use and control measures are needed with a One Health approach to identify the main drivers of antimicrobial resistance due to interconnected human, animal and environmental habitats.

Funding Details

This study was supported by Fondo Nacional de Desarrollo Científico , Tecnológico y de Innovación Tecnológica (FONDECYT - Perú) and Universidad Científica del Sur within the “Proyecto de Mejoramiento y Ampliación de los Servicios del Sistema Nacional de Ciencia, Tecnología e Innovación Tecnológica” [contract: 08-2019-FONDECYT-BM-INC-INV"]. This study has been performed within the frame of the net P220RT0168 from Programa Iberoamericano de Ciencia y Tecnología para el Desarrollo (CYTED). Meanwhile, the high levels of resistance to antimicrobial agents such as ampicillin (80%), cephalothin (100%), nalidixic acid (75.7%) or tetracycline (40%), among others, detected in E. coli from a slaughterhouse environment, probably reflect environmental contamination by antimicrobial-resistant microorganisms colonizing sacrificed livestock. This finding is supported by the available literature about AMR levels of E. coli from both livestock and food-marketed meats (see sections 3 and 3.2 respectively). Curiously, while 31.5% of the isolates from slaughterhouse surfaces were ciprofloxacin intermediate, no ciprofloxacin-resistant was isolated. Nevertheless, 75.5% of isolates showed nalidixic acid resistance (Table 4). Of note, the phenotype NalR, CipI/S (or another fluoroquinolone) is usually related to the presence of a single mutation in gyrA [84, 97] and is associated with enhanced facility to drive to selection of additional target mutations and therapeutic failure when fluoroquinolones are used [97, 98, 99].In a few cases, AMR levels >60% were detected, with nalidixic acid and tetracycline reaching this level in samples collected from Northern Caimans living in semi-captivity in San Juan del Lurigancho [72]. In addition, as in other cases, resistance levels to antimicrobial agents such as ancient β-lactam agents or several aminoglycosides were also high. Of note the study by Castañón also detected a high number of intermediate isolates, in agreement with the results of Vega et al. in shelter dogs in the same area [69], supporting the presence of local specificity favoring the natural selection of E. coli presenting low levels of AMR.This study was supported by Fondo Nacional de Desarrollo Científico, Tecnológico y de Innovación Tecnológica (FONDECYT - Perú) and Universidad Científica del Sur within the “Proyecto de Mejoramiento y Ampliación de los Servicios del Sistema Nacional de Ciencia, Tecnología e Innovación Tecnológica” [contract: 08-2019-FONDECYT-BM-INC-INV"]. This study has been performed within the frame of the net P220RT0168 from Programa Iberoamericano de Ciencia y Tecnología para el Desarrollo (CYTED).
FundersFunding numbers
Programa Iberoamericano de Ciencia y Tecnología para el Desarrollo
-
Servicios del Sistema Nacional de Ciencia,Tecnología e Innovación Tecnológica
08-2019-FONDECYT-BM-INC-INV
Universidad Científica del Sur-
CYTED
-
FONDECYT
-

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